Peer-reviewed journal articles 2024

A. Golmohammadi, J. P. Payonk, U. v. Rienen and R. Appali. A Computational Study on the Activation of Neural Transmission in Deep Brain Stimulation.  IEEE Transactions on Biomedical Engineering (2024), https://doi.org/10.1109/TBME.2024.3489799 

M. Khurram, S. Neuber, A. Sill, C.A. Helm: Highly Electrically Conductive PEDOT:PSS Films via Layer-By-Layer Electrostatic Self-Assembly. ACS Omega  (2024). https://doi.org/10.1021/acsomega.4c08946 

P.S. Lee, K.K. Sriperumbudur, J.E. Dawson, U. van Rienen, R. Appali: Mathematical models on bone cell homeostasis and kinetics in the presence of electric fields: A review. Prog. Biomed. Eng. 7, 012004, (2024). https://doi.org/10.1088/2516-1091/ad9530 

J.P. Payonk, H. Bathel, N. Arbeiter, M. Kober, M. Fauser, A. Storch, U. van Rienen, J. Zimmermann: Improving computational models of deep brain stimulation through experimental calibration. Journal of Neuroscience Methods, 110320 (2024). https://doi.org/10.1016/j.jneumeth.2024.110320

T. Köster, P. Henning, T. Warnke, A. Uhrmacher: Expressive rule-based modeling and fast simulation for dynamic compartments. PLOS ONE 19(10) (2024), https://doi.org/10.1371/journal.pone.0312813

N. Abroug, L. Schöbel, A. Boccaccini, H. Seitz, Quantitative Macromolecular Modeling Assay of Biopolymer-Based Hydrogels. Gels 10(11) (2024), https://doi.org/10.3390/gels10110676 

K. Budde-Sagert, S. Krüger, C. Sehlke, H. Lemcke, A. Jonitz-Heincke, R. David, R. Bader, A. Uhrmacher (2024): detectCilia: An R Package for Automated Detection and Length Measurement of Primary Cilia. Bioinformatics and Biology Insights. 2024;18. https://doi.org/10.1177/11779322241280431 

K. Gierend, F. Krüger, S. Genehr, F. Hartmann, F. Siegel, D. Waltemath, T. Ganslandt & A. A. Zeleke (2024): Provenance Information for Biomedical Data and Workflows: Scoping Review. J Med Internet Res; 26:e51297. https://doi.org/10.2196/51297 

D. Schindler, T. Hossain, S. Spors & F. Krüger (2024): A multilevel analysis of data quality for formal software citation. Quantitative Science Studies; 5 (3): 637–667. doi: https://doi.org/10.1162/qss_a_00309 

J. Zimmermann, A. R. Farooqi, U. van Rienen, Electrical stimulation for cartilage tissue engineering - A critical review from an engineer's perspective.  Heliyon 10 (19), e38112 (2024). https://doi.org/10.1016/j.heliyon.2024.e38112

A. Klinder, F. Möws, J. Ziebart, Y. Su, C. Gabler, A. Jonitz-Heincke, U. van Rienen, M. Ellenrieder, R. Bader, Effects of electrical stimulation with alternating fields on the osseointegration of titanium implants in the rabbit tibia - a pilot study. Front. Bioeng. Biotechnol. 12 (2024). https://doi.org/10.3389/fbioe.2024.1395715

K. Spiliotis, R. Appali, A. Fontes Gomes, J.P. Payonk, S. Adrian, U. van Rienen, J. Starke, R. Koehling, Utilising activity patterns of a complex biophysical network model to optimise intra-striatal deep brain stimulation. Sci Rep 14, 18919 (2024). https://doi.org/10.1038/s41598-024-69456-7 

M. Wendt, F. Dorn, R. Lange, R. Ludwig, J. Berdermann, I. Barke, S. Speller. Ionic liquid coating for charge mitigation of solar modules in space: Electron microscopy on insulating nanosphere lithography patterned surfaces. J. Space Weather Space Clim. 14(18), (2024), https://doi.org/10.1051/swsc/2024019 

M. Statz, H. Weber, F. Weis, M. Kober, H. Bathel, F. Plocksties, U. van Rienen, D. Timmermann, A. Storch, M. Fauser. Subthalamic nucleus deep brain stimulation induces functional deficits in norepinephrinergic neurotransmission in a Parkinson’s disease model.Brain Res. 1841, 149128 (2024), https://doi.org/10.1016/j.brainres.2024.149128 

Polley C, Riaz A, Lund H, Boccaccini AR, Seitz H, Field-Assisted Sintering of Barium Titanate and 45S5 Bioactive Glass for Biomedical Applications.  Ceram. Int. (2024) https://doi.org/10.1016/j.ceramint.2024.07.107 

Weber H, Statz M, Markert F, Storch A, Fauser M, Circadian variations influence anxiety-related behaviour, olfaction, and hedonic response in male Sprague–Dawley rats. Behav. Brain Res. 471, 115134 (2024) https://doi.org/10.1016/j.bbr.2024.115134 

Sass JO, Saemann M, Kebbach M, Soodmand E, Wree A, Bader R, Kluess D, The Morphology of the Femur Influences the Fracture Risk during Stumbling and Falls on the Hip—A Computational Biomechanical Study. Life 14(7) (2024) https://doi.org/10.3390/life14070841 

Wendt M, Dorn F, Lange R, Ludwig R, Berdermann J, Barke I, Speller S, Ionic Liquid coating for charge mitigation of solar modules in space: Electron microscopy on insulating nanosphere lithography patterned surfaces. J. Space Weather Space Clim. (2024) https://doi.org/10.1051/swsc/2024019

Raben H, Kämmerer PW, van Rienen U, Addressing Model Uncertainties in Finite Element Simulation of Electrically Stimulated Implants for Critical-Size Mandibular Defects. IEEE Trans. Biomed. Eng.71(10), pp. 3055-3068, (2024) https://doi.org/10.1109/TBME.2024.3408076 

Fauser M, Payonk JP, Weber H, Statz M, Winter C, Hadar R, Appali R, van Rienen U, Brandt MD, Storch A. Subthalamic nucleus but not entopeduncular nucleus deep brain stimulation enhances neurogenesis in the SVZ-olfactory bulb system of Parkinsonian rats. Front. Cell. Neurosci. 18:1396780. (2024) https://doi.org/10.3389/fncel.2024.1396780 

Sriperumbudur KK, Appali R, Gummer AW, van Rienen U. Understanding the impact of modiolus porosity on stimulation of spiral ganglion neurons by cochlear implants. Sci Rep 14, 9593 (2024). https://doi.org/10.1038/s41598-024-59347-2 

Geiger F, Bathel H, Spors S, Bader R, Kluess D. Monitoring of Hip Joint Forces and Physical Activity after Total Hip Replacement by an Integrated Piezoelectric ElementTechnologies. 2024; 12(4):51. https://doi.org/10.3390/technologies12040051 

Buenning ME, Bielfeldt M, Nebe B, Staehlke S. Short-Time Alternating Current Electrical Stimulation and Cell Membrane-Related Components. Applied Sciences. 2024; 14(2):812, https://doi.org/10.3390/app14020812

Lüttig A, Perl S, Zetsche M, Richter F, Franz D, Heerdegen M, Köhling R, Richter A. Short-term stimulations of the entopeduncular nucleus induce cerebellar changes of c-Fos expression in an animal model of paroxysmal dystonia. Brain Research. 2024 1823, 148672, https://doi.org/10.1016/j.brainres.2023.148672

 

Peer-reviewed conference papers 2024

J.P. Payonk, K. Spiliotis, J. Starke, R. Köhling, U. van Rienen, R. Appali. Evaluating the Impact of a Complex Volume Conductor Model on Network Dynamics for Deep Brain Stimulation. 2024 International Conference on Electromagnetics in Advanced Applications (ICEAA), pp. 675-680, 02.-06.09.2024, Lisbon, Portugal, https://doi.org/10.1109/ICEAA61917.2024.10701721 

N. Kruse, A. Wache, H. Aschemann and J. Starke, Data-Driven Model Predictive Control of a Nonlinear Ball-on-a- Wheel System2024 American Control Conference (ACC), Toronto, ON, Canada, 10-12 July 2024, pp. 887-892, https://doi.org/10.23919/ACC60939.2024.10644348 

P. Wilsdorf, S. Zschaler, F. Haack, A. Uhrmacher, Potential and Challenges of Assurance Cases for Simulation Validation. Proceedings of the 2024 Winter Simulation Conference (WSC 2024), Orlando, Florida, USA, 15-18 Dec 2024, accepted

R. Hauser, F: Grützmacher, C. Haubelt, Approximative Sensor Data Resynchronization for Wireless Burst Transmission Protocols. 2024 IEEE 20th International Conference on Factory Communication Systems (WFCS), Toulouse, France, 2024, pp. 1-8, https://doi.org/10.1109/WFCS60972.2024.10540885 

U. van Rienen, 25 Years Computational Electromagnetics @ SCEE. In: van Beurden, M., Budko, N.V., Ciuprina, G., Schilders, W., Bansal, H., Barbulescu, R. (eds) Scientific Computing in Electrical Engineering. SCEE 2022. Mathematics in Industry(), vol 43. Springer, Cham. (2024) https://doi.org/10.1007/978-3-031-54517-7_13 

L.V. Che, J. Zimmermann, H. Bathel, A. Weizel, H. Seitz, U. van Rienen, Validation-Oriented Modelling of Electrical Stimulation Chambers for Cartilage Tissue Engineering.  In: van Beurden, M., Budko, N.V., Ciuprina, G., Schilders, W., Bansal, H., Barbulescu, R. (eds) Scientific Computing in Electrical Engineering. SCEE 2022. Mathematics in Industry(), vol 43. Springer, Cham. https://doi.org/10.1007/978-3-031-54517-7_6

Preprints 2024

L. Böttcher, H. Wallner, N. Kruse, W. Just, I. Barke, J. Starke, S. Speller. Exposing hidden periodic orbits in scanning force 2 microscopy, 2024, https://www.math.uni-rostock.de/~wj/ms/np_24.pdf 

M. Naeimi, K. Engster, I. Barke, S. Speller,  Morphology and structural properties of thin rubrene crystallites grown on graphite, arXiv:2404.14311. April 22 2024. https://doi.org/10.48550/arXiv.2404.14311 

E. Akindji, J. Slipantschuk, O.F. Bandtlow, W. Just, Convergence properties of dynamic mode decomposition for analytic interval mapsarXiv:2404.08512. April 12 2024. https://doi.org/10.48550/arXiv.2404.08512 

T. Köster, P. Henning, T. Warnke, A. Uhrmacher, Expressive modeling and fast simulation for dynamic compartments, bioRxiv. April 02 2024. https://doi.org/10.1101/2024.04.02.587672 

H. Raben, P.W. Kämmerer, U. van Rienen, Addressing Model Uncertainties in Finite Element Simulation of Electrically Stimulated Implants for Critical-Size Mandibular Defects,  TechRxiv. March 30, 2024. https://doi.org/10.36227/techrxiv.171177278.80020666/v1 

A. Golmohammadi, J.P. Payonk, U. van Rienen, R. Appali, A Computational Study on the Activation of Neural Transmission in Deep Brain StimulationTechRxiv. January 29, 2024. https://doi.org/10.36227/techrxiv.170654411.19625651/v1 

K. Spiliotis, R. Köhling, W. Just, J. Starke, Data-driven and equation-free methods for neurological disorders: Analysis and control of the striatum network, 2024, https://www.math.uni-rostock.de/~wj/ms/fnp_24.pdf

O.F. Bandtlow, W. Just, J. Slipantschuk, A numerical study of rigidity of hyperbolic splittings in simple two-dimensional maps, 22 Feb 2024, https://arxiv.org/html/2402.14770v1

N. Kruse, H. Wallner, A. Dittus, L. Böttcher, I. Barke, S. Speller, J. Starke, W. Just, Large basins of attraction for control-based continuation of unstable periodic states, February 9, 2024, https://www.math.uni-rostock.de/~wj/ms/nd_24.pdf

Patents

U. van Rienen, H. Raben, W. Radlof, M. Sander, M. Dau, J. Zimmermann, H. Bathel, N. Arbeiter, N. Engel, L. Lembcke. Knochenimplantat sowie Verfahren und Computerprogrammprodukt zur Herstellung eines Knochenimplantats. Official file number: 10 2024 117 508.7, date of application: 20.06.2024

Protocols

I. Gregorski, H. Rebl, Easy tracking of unstained cells in ImageJ. protocols.io, September 23 2024, https://dx.doi.org/10.17504/protocols.io.261ged7rov47/v1 

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